Protein Alignment Gsc and sia3

DIOPT Version :10

• Sequence 1: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Sequence 2: XP_002942209.2
• Gene: sia3 / 100490453
• XenbaseID: XB-GENE-480406
• Length: 247
• Species: Xenopus tropicalis
• Alignment Length: 119
• Identity: 43/119 - (36%)
• Similarity: 57/119 - (47%)
• Gaps: 11/119 - (9%)

  Fly   335 PPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKWRKQK 399
            |....:.|.|||:|:||.:.|:..||...|||.|.|..:|....:.|.|::|||:||||:...:.
 Frog   132 PTLSARSRKRTIYTKEQTDFLQNQFDINPYPDFVSRCHIAQLTGVPEPRIQVWFQNRRARHLSKI 196

  Fly   400 REEQERLRKLQEEQCGSTTNGTTNSSSGTTSSTGNGSLTVKCPGS-DHYSAQLV 452
            ...||  ..:||   .||..||....|....||...|     |.| |.|...:|
 Frog   197 HRSQE--PTIQE---ASTLTGTQKLISHVHQSTNPRS-----PRSQDQYLPDMV 240

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gsc	NP_001137762.2	Homeodomain	341..397	CDD:459649	25/55 (45%)
sia3	XP_002942209.2	COG5576	<123..236	CDD:227863	41/113 (36%)
		Homeodomain	139..192	CDD:459649	25/52 (48%)