DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and HB18

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_177248.3 Gene:HB18 / 843431 AraportID:AT1G70920 Length:206 Species:Arabidopsis thaliana


Alignment Length:143 Identity:39/143 - (27%)
Similarity:70/143 - (48%) Gaps:15/143 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DKGTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWR 66
            |..:..|::::.|.|.....|  ||.:|.:.|......:::||..:.|::.:|:||||||||:.:
plant    60 DSNSGGRRRKKLRLTKEQSHL--LEESFIQNHTLTPKQKKDLATFLKLSQRQVEVWFQNRRARSK 122

  Fly    67 KQ------EKIGGLGGDYKEGALDLDVSYDD-SAVLGQLDSALGGGGTLLPDTPPQSSNSLDNEL 124
            .:      |.:....|..||....|.:..:: .|:.....|||    |:.|.. .:.::::||:.
plant   123 LKHTEMECEYLKRWFGSLKEQNRRLQIEVEELRALKPSSTSAL----TMCPRC-ERVTDAVDNDS 182

  Fly   125 KASYGTGAMSPSR 137
            .| ...||:..||
plant   183 NA-VQEGAVLSSR 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 19/55 (35%)
HB18NP_177248.3 HOX 66..122 CDD:197696 20/57 (35%)
HALZ 124..167 CDD:128634 9/46 (20%)

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