DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pph13 and AtHB23

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_564268.1 Gene:AtHB23 / 839587 AraportID:AT1G26960 Length:255 Species:Arabidopsis thaliana


Alignment Length:189 Identity:44/189 - (23%)
Similarity:70/189 - (37%) Gaps:35/189 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DKGTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWR 66
            |...|..|:||    .|..||:.||:.|:..:..:...:.|||..:.|...::.:|||||||:.:
plant    64 DGSKMGEKKRR----LNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQIAIWFQNRRARSK 124

  Fly    67 KQEKIGGLGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPPQSSNSLDNELKASYG-- 129
            .::    |..||.......:...|::.||...:..|......|....|..|.:|:.|.:.|..  
plant   125 TKQ----LEKDYDMLKRQFESLRDENEVLQTQNQKLQAQVMALKSREPIESINLNKETEGSCSDR 185

  Fly   130 ----TGAMSPSRLSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHPQMDSDNQ 184
                :|.:.|..:.....|.                     :||.|......|..|..|
plant   186 SENISGDIRPPEIDSQFALG---------------------HPPTTTTMQFFQNSSSEQ 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 19/55 (35%)
AtHB23NP_564268.1 HOX 71..124 CDD:197696 20/56 (36%)
HALZ 126..167 CDD:460477 8/44 (18%)

Return to query results.
Submit another query.