DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and HB5

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_201334.1 Gene:HB5 / 836656 AraportID:AT5G65310 Length:312 Species:Arabidopsis thaliana


Alignment Length:319 Identity:63/319 - (19%)
Similarity:109/319 - (34%) Gaps:123/319 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQE 69
            |...|:||    ....|::.||:.|:..:..:...:.:||..:.|...:|.:|||||||:|:.::
plant    68 TAAEKKRR----LGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQ 128

  Fly    70 KIGGLGGDYKEGALDLD----------VSYDDSAVLGQLDSALGGGGTLLPDTPPQSSNSLDNEL 124
                |..||  |.|..:          :..|:.::|||:                       .||
plant   129 ----LERDY--GVLKSNFDALKRNRDSLQRDNDSLLGQI-----------------------KEL 164

  Fly   125 KASYGTGAMSPSRLSPNIFLNLNIDHL-GLERGGSGLSMEWSTYPPQTQAQTHPQMDSDNQLQQH 188
            ||                  .||::.: |:|..|:..::|.:    |:....:..::..::....
plant   165 KA------------------KLNVEGVKGIEENGALKAVEAN----QSVMANNEVLELSHRSPSP 207

  Fly   189 PPQQHASDPIHAGSSSHHQQQQQQHQQEQHNPQLHPGLEFAASL-------------SLDMTDGS 240
            ||                           |.|...|..|.|..:             ..|.:|.|
plant   208 PP---------------------------HIPTDAPTSELAFEMFSIFPRTENFRDDPADSSDSS 245

  Fly   241 SAYDEMKFLSVDVDQFTIDSFKADCILSMEQSQMQAYGGHSQLVG--------SSNELC 291
            :..:|      :....|:::..|....::|.|.|   |..||.|.        |..|.|
plant   246 AVLNE------EYSPNTVEAAGAVAATTVEMSTM---GCFSQFVKMEEHEDLFSGEEAC 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 18/55 (33%)
HB5NP_201334.1 Homeodomain 72..125 CDD:459649 18/56 (32%)
HALZ 127..168 CDD:460477 13/87 (15%)

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