DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and HAT1

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_193476.1 Gene:HAT1 / 827457 AraportID:AT4G17460 Length:282 Species:Arabidopsis thaliana


Alignment Length:194 Identity:37/194 - (19%)
Similarity:65/194 - (33%) Gaps:81/194 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LAVRIDLTEARVQVWFQNRRAKWRKQEKIGGLGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGT 107
            ||.::.||..:|:||||||||:.:.::             .::|..|....|             
plant   165 LAKKLGLTARQVEVWFQNRRARTKLKQ-------------TEVDCEYLKRCV------------- 203

  Fly   108 LLPDTPPQSSNSLDNELKASYGTGAMSPSRLSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQ 172
               :...:.:..|:.|      ...:...:|||.::..::                    ||.| 
plant   204 ---EKLTEENRRLEKE------AAELRALKLSPRLYGQMS--------------------PPTT- 238

  Fly   173 AQTHPQMDSDNQLQQHPPQQHASDPIHAGSSSHHQQQQQQHQQEQHNPQLHPGLEFAASLSLDM 236
                        |...|..:..:.|    |||:|.|:         :..|.|.|:.|...:.|:
plant   239 ------------LLMCPSCERVAGP----SSSNHNQR---------SVSLSPWLQMAHGSTFDV 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 13/23 (57%)
HAT1NP_193476.1 HD-ZIP_N 8..98 CDD:461370
HOX 134..188 CDD:197696 13/22 (59%)
HALZ 190..233 CDD:128634 8/77 (10%)
Blue background indicates that the domain is not in the aligned region.

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