DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and HB6

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_565536.1 Gene:HB6 / 816775 AraportID:AT2G22430 Length:311 Species:Arabidopsis thaliana


Alignment Length:268 Identity:56/268 - (20%)
Similarity:91/268 - (33%) Gaps:94/268 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DKGTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWR 66
            ::|.:...:::.|.:.|  |::.||:.|:..:..:...:.:||..:.|...:|.||||||||:|:
plant    53 ERGHVGLSEKKRRLSIN--QVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWK 115

  Fly    67 KQEKIGGLGGDYKEGALDLDVSYD------DS---------AVLGQLDSALGGGG---------- 106
            .::    |..||  |.  |...||      ||         ..:.:|.:.|.|||          
plant   116 TKQ----LEKDY--GV--LKTQYDSLRHNFDSLRRDNESLLQEISKLKTKLNGGGGEEEEEENNA 172

  Fly   107 ---------------------TLLPDTPPQSSNSLDN-------------ELKA---SYGTGAMS 134
                                 |..|.:|||.....|.             .|||   |:...|.|
plant   173 AVTTESDISVKEEEVSLPEKITEAPSSPPQFLEHSDGLNYRSFTDLRDLLPLKAAASSFAAAAGS 237

  Fly   135 PSRLSPNIFLNLNIDHLGLERGGSGLSM---------EWSTYPPQTQAQTHPQMDSDNQL----- 185
            ......:..||        |...|.:::         .:..:....|.:.|....|..:.     
plant   238 SDSSDSSALLN--------EESSSNVTVAAPVTVPGGNFFQFVKMEQTEDHEDFLSGEEACEFFS 294

  Fly   186 QQHPPQQH 193
            .:.||..|
plant   295 DEQPPSLH 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 19/55 (35%)
HB6NP_565536.1 Homeodomain 62..115 CDD:459649 18/54 (33%)
HALZ 117..158 CDD:460477 10/48 (21%)

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