DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and hmx4

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001038836.2 Gene:hmx4 / 751654 ZFINID:ZDB-GENE-060825-142 Length:238 Species:Danio rerio


Alignment Length:97 Identity:29/97 - (29%)
Similarity:48/97 - (49%) Gaps:14/97 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQ------ 68
            :::.||.|:..|:.:||..|....|.....|..||..:.|||.:|::||||||.|.::|      
Zfish   112 KKKTRTIFSKRQIFQLESTFDMKRYLSSAERACLANSLQLTETQVKIWFQNRRNKLKRQLSTELE 176

  Fly    69 ---EKIGGLGGDYKEGALDLDVSYDDSAVLGQ 97
               .:.|.:|     ..:.|...|.::.:||:
Zfish   177 GPNSEFGDIG-----KTVPLPALYKENNLLGR 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 22/55 (40%)
hmx4NP_001038836.2 Homeodomain 115..169 CDD:459649 22/53 (42%)

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