DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and Duxf3

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:XP_030101272.1 Gene:Duxf3 / 74399 MGIID:1921649 Length:674 Species:Mus musculus


Alignment Length:486 Identity:102/486 - (20%)
Similarity:156/486 - (32%) Gaps:177/486 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 MKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWR---- 66
            ::...||.||...:||.:.|.:||:|...|....|||||....|.|..:.:|||||||:.|    
Mouse   108 LRSSGRRPRTRLTSLQRRILGQAFERNPRPGFATREELARDTGLPEDTIHIWFQNRRARRRHRRG 172

  Fly    67 -----KQEKIGGLGGD---------YKEGALDLDVSYDDSAVLGQLDSALGGGGTLLP-DTPPQS 116
                 .|:.:...|.|         .:|||        ..::|.|.::...|..|..| |.|...
Mouse   173 RPTAQDQDLLASQGSDGAPTGPEGREREGA--------QESLLPQEEAGSTGMDTSSPSDLPSFC 229

  Fly   117 SNSLDNELKASYGTG-------AMSPSRLSPNIF---------------LNLNIDHLGLERGGSG 159
            ..|...::....|.|       |.:...|.|.:.               |||:.|..|....||.
Mouse   230 RESQPFQVAQPRGAGQQEAPTQAGNAGSLEPLLDQLLDEVQVEEPAPAPLNLDGDPGGRVHEGSQ 294

  Fly   160 LSMEWSTYPPQTQA-----QTHPQMDSDNQLQQHPPQQHASDPIHAGSSSHHQQQQ--------- 210
            .|. |    ||.:|     .|....||::..::..|.| .:.|..:|......|..         
Mouse   295 KSF-W----PQEEAGSTGMDTSSPSDSNSFCRESFPSQ-VAQPCGSGQEDARTQADSTGPLELLL 353

  Fly   211 -----QQHQQEQHNP-----------QLHPG-------LEFAASLSLDM---------------- 236
                 .:.|:|:|.|           :.|.|       ||.||:..:|.                
Mouse   354 LDQLLDEVQKEEHVPVPLDWGRNPGSREHEGSQDSLLPLEEAANSGMDTSIPSIWPTFCRESQPP 418

  Fly   237 --------------TDGSSA----------YDEMKF-------LSVDVD------QFTIDSFKAD 264
                          |.|.:.          .||::.       |:.|||      :.:.:||   
Mouse   419 QVAQPSGPGQAQAPTQGGNTDPLELLLYQLLDEVQVEEHAPAPLNWDVDPGGRVHEGSWESF--- 480

  Fly   265 CILSMEQSQMQAYGGHSQLVGSSNELCLD----------GIGMSSFGMEEGEPKSPPSLLVLDKS 319
                ..|.:..:.|..:.....||..|.:          |.|... ...:.....|..||:||: 
Mouse   481 ----WPQREAGSTGLDTSSPSDSNSFCRESQTSQVAQPCGSGQED-ARTQANSTGPLELLLLDQ- 539

  Fly   320 LPSLSIGVEGIADLVEQLHHHQHEGGPVGGG 350
                         |::::...:|...|:..|
Mouse   540 -------------LLDEVQKEEHVPAPLDWG 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 26/64 (41%)
Duxf3XP_030101272.1 homeodomain 19..73 CDD:238039
HOX 112..162 CDD:197696 20/49 (41%)
Blue background indicates that the domain is not in the aligned region.

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