Protein Alignment Pph13 and Vsx1

DIOPT Version :10

• Sequence 1: NP_477330.1
• Gene: Pph13 / 33239
• FlyBaseID: FBgn0023489
• Length: 357
• Species: Drosophila melanogaster
• Sequence 2: NP_001103016.1
• Gene: Vsx1 / 689704
• RGDID: 1305667
• Length: 369
• Species: Rattus norvegicus
• Alignment Length: 229
• Identity: 81/229 - (35%)
• Similarity: 99/229 - (43%)
• Gaps: 64/229 - (27%)

  Fly     7 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKI 71
            |||:||:||.|...||:|||:||...|||||:.||.|||:.:|.|.|:|||||||||||||:||.
  Rat   165 KRKKRRHRTVFTAHQLEELEKAFGEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKR 229

  Fly    72 GGLGGDYKEGALDLDVSYDDSAVLGQ--LDSALGGGGTLLPDTPPQSSNSLDNELKA-SYGTGAM 133
            .|                 .|:|:.:  |..|:......|||:...|::||...... ..|....
  Rat   230 WG-----------------GSSVMAEYGLYGAMVRHCIPLPDSVLNSADSLQGSCAPWLLGMHKK 277

  Fly   134 SPSRLSPNIFLNL----NIDHL---------GLERG-------------------GSGLSMEWST 166
            |.....|.....|    .:|||         |.|||                   .|....|...
  Rat   278 STEMRKPESEEKLAGLWELDHLRKGAKKDEDGPERGPGKASLNPEGSLEDVAIDLSSSSRQETKK 342

  Fly   167 YP--PQTQAQTH---PQMDSDNQLQQHPPQQHAS 195
            .|  ..||..||   ||:     ||  |||..||
  Rat   343 MPSGSSTQGCTHAPGPQV-----LQ--PPQVGAS 369

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pph13	NP_477330.1	Homeodomain	11..67	CDD:459649	36/55 (65%)
Vsx1	NP_001103016.1	Homeodomain	169..225	CDD:459649	36/55 (65%)