DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and Rhox4a

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001034777.1 Gene:Rhox4a / 664609 MGIID:3580240 Length:205 Species:Mus musculus


Alignment Length:49 Identity:11/49 - (22%)
Similarity:19/49 - (38%) Gaps:17/49 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 GCHNSNLNGIYKNSVEGENIVW--------NTYKRYWGLAYSRMMIRET 141
            ||.|...     ..:..:|::|        ::.:|||.|.    .:.||
Mouse    22 GCVNRRF-----YHLTSDNLIWVKIYSTAFSSKRRYWKLT----SVEET 61

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649
Rhox4aNP_001034777.1 homeodomain 129..187 CDD:238039
Blue background indicates that the domain is not in the aligned region.

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