DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and hoxa3a

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_571609.2 Gene:hoxa3a / 58049 ZFINID:ZDB-GENE-000823-3 Length:410 Species:Danio rerio


Alignment Length:239 Identity:68/239 - (28%)
Similarity:94/239 - (39%) Gaps:64/239 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKIGGLG 75
            :|.||.:.:.||.|||:.|....|.....|.|:|..::|||.::::||||||.|::|.:|  |||
Zfish   164 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQK--GLG 226

  Fly    76 GDYKEGALDLDVSYDDSAVLGQLDSALGGGG-------------TLLPDTP-------PQSS--- 117
            .....||     ....|.|  .|.|..||||             ::..|:|       |||:   
Zfish   227 MMPSPGA-----QSPHSPV--SLSSGGGGGGGSAYLSSMHSLVNSVTYDSPSPASYNKPQSNTYS 284

  Fly   118 --------NSLDNELKASYGTGAMSPSRLSPNIFLNLNIDHLGLE--------RGGSGLSMEWST 166
                    |:.....|...|||..:|...:.:|..|.|   .|.:        .||.|.|.....
Zfish   285 LPTSYPPLNNCPPPQKRYQGTGTATPEYDTHHIQGNNN---YGTQVQGSPVYVSGGGGYSDSLVG 346

  Fly   167 YPPQTQAQTHPQMDSDNQLQQHPPQQHA--SDPIHAGSSSHHQQ 208
            ........||         ..||.|.:.  :..|..|:|  |||
Zfish   347 MGASVFGLTH---------LPHPSQGNIDYNGAITMGNS--HQQ 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 23/55 (42%)
hoxa3aNP_571609.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 79..126
Antp-type hexapeptide 127..132
Homeodomain 164..220 CDD:459649 23/55 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 222..249 11/35 (31%)
DUF4074 346..408 CDD:463833 11/45 (24%)
Blue background indicates that the domain is not in the aligned region.

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