DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and alx3

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:XP_021327753.2 Gene:alx3 / 566955 ZFINID:ZDB-GENE-120221-3 Length:364 Species:Danio rerio


Alignment Length:231 Identity:85/231 - (36%)
Similarity:105/231 - (45%) Gaps:66/231 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKI 71
            |.|:||.||||:|.||:|||:.||:||||||:.||:||:|.:|||||||||||||||||||:|:.
Zfish   152 KNKKRRNRTTFSTFQLEELEKVFQKTHYPDVYAREQLALRTELTEARVQVWFQNRRAKWRKRERY 216

  Fly    72 GGLGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLP--DTPPQSSNSLDNELKASYGTGAMS 134
            |.:.......|...|:|                   |||  || .|..|||......:.|.|..|
Zfish   217 GKMQEVRNHFAATYDIS-------------------LLPRSDT-YQMQNSLWPSGAGATGAGGAS 261

  Fly   135 PSRLSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHPQMDSDNQLQQHPPQQHASDPIH 199
            .:.:            ||.|...|..   .|.||                   ||   |.:.|..
Zfish   262 SACV------------LGTENMPSSC---MSPYP-------------------HP---HGNLPGL 289

  Fly   200 AGSSS---HHQQQQQQHQQEQHNPQLHPGLEFAASL 232
            .|.|:   ||    ..|....|:|..||.:....||
Zfish   290 MGMSASPGHH----HHHHHHHHHPSHHPSINGIYSL 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 42/55 (76%)
alx3XP_021327753.2 None

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