DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and pitx2

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001017227.1 Gene:pitx2 / 549981 XenbaseID:XB-GENE-482492 Length:345 Species:Xenopus tropicalis


Alignment Length:228 Identity:74/228 - (32%)
Similarity:108/228 - (47%) Gaps:40/228 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DKGTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWR 66
            |..:.|::|||.||.|.:.||||||..|||..|||:..|||:||..:||||||:|||:|||||||
 Frog   105 DDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWR 169

  Fly    67 KQEK--------------IGGLGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLP-----DT 112
            |:|:              ..||...|.:  :....||::.|..|...::|....  .|     :.
 Frog   170 KRERNQQAELCKNGFGPQFNGLMQPYDD--MYPSYSYNNWAAKGLTSASLSTKS--FPFFNSMNV 230

  Fly   113 PPQSSNSL---DNELKASYGTGAMSPSRLS--PNIFLNL--NIDHLGLERGGSGLSMEWSTYPPQ 170
            .|.||.|:   .|.:.:...:..|.||.::  |...||.  |:::|......:.:......|.|.
 Frog   231 NPLSSQSMFSSPNSISSMSMSSGMVPSAVTGVPGSGLNSLNNLNNLSNPSLNTAVPTSACPYAPP 295

  Fly   171 TQAQTHPQMDSDN--------QLQQHPPQQHAS 195
            |....:  .|:.|        :.:||....:||
 Frog   296 TPPYVY--RDTCNSSLASLRLKAKQHSSFGYAS 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 37/55 (67%)
pitx2NP_001017227.1 Homeodomain 114..170 CDD:459649 37/55 (67%)
OAR 303..320 CDD:461067 3/16 (19%)

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