DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and gsc

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001016704.1 Gene:gsc / 549458 XenbaseID:XB-GENE-486771 Length:243 Species:Xenopus tropicalis


Alignment Length:82 Identity:39/82 - (47%)
Similarity:53/82 - (64%) Gaps:12/82 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDKGTMK------------RKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEAR 53
            |:.||:.            |::||:||.|...||:.||..||.|.||||..||:||.|:.|.|.:
 Frog   127 MNVGTLSRTELQLLNQLHCRRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEK 191

  Fly    54 VQVWFQNRRAKWRKQEK 70
            |:|||:|||||||:|::
 Frog   192 VEVWFKNRRAKWRRQKR 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 33/55 (60%)
gscNP_001016704.1 Homeodomain 149..205 CDD:459649 33/55 (60%)

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