DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and hoxb3

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001015971.1 Gene:hoxb3 / 548725 XenbaseID:XB-GENE-482576 Length:386 Species:Xenopus tropicalis


Alignment Length:236 Identity:63/236 - (26%)
Similarity:97/236 - (41%) Gaps:35/236 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKIGGL- 74
            :|.||.:.:.||.|||:.|....|.....|.|:|..::|:|.::::||||||.|::|.:|:.|: 
 Frog   157 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKVKGMS 221

  Fly    75 ---GGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPPQSSNSLDNELKASYGTGAMSPS 136
               ||........|.:. ..:..||.:.|..   ......:||..:.|..|....:.|.|..|..
 Frog   222 SSSGGASPTSTPPLSMQ-SSAGFLGSMHSMT---ANYEAPSPPPFNKSHQNAYYQNPGKGCPSQQ 282

  Fly   137 RLSPNIFLNLNIDHLGLE-RGGSGLS--MEWS------TYPPQTQAQTHP------------QMD 180
            :.....   ...||.||: .||:.:|  |:.|      .|.....||..|            .||
 Frog   283 KYGNTA---AEYDHHGLQGNGGAYVSPNMQGSPVYVGGNYVDSVPAQGPPLYGLNHLAHQPTNMD 344

  Fly   181 SDNQLQQHPPQQHA---SDPIHAGSSSHHQQQQQQHQQEQH 218
            .:........|.||   ..|.:...|:|||.:.|:..:..|
 Frog   345 YNGAPPMPASQHHAPCDPHPTYTELSAHHQGRIQEAPKLTH 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 22/55 (40%)
hoxb3NP_001015971.1 Homeodomain 157..213 CDD:459649 22/55 (40%)
DUF4074 325..384 CDD:463833 14/58 (24%)

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