DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and Emx2

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001102639.1 Gene:Emx2 / 499380 RGDID:1564797 Length:253 Species:Rattus norvegicus


Alignment Length:103 Identity:38/103 - (36%)
Similarity:56/103 - (54%) Gaps:17/103 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 MKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQ-- 68
            :.||.:|.||.|:..||..||.||::.||.....|::||..:.|||.:|:|||||||.|:::|  
  Rat   151 LARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKL 215

  Fly    69 EKIGGLGGDYKEGA---------------LDLDVSYDD 91
            |:.|......|:|.               .::||:.||
  Rat   216 EEEGSDSQQKKKGTHHINRWRIATKQASPEEIDVTSDD 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 27/55 (49%)
Emx2NP_001102639.1 Homeodomain 156..212 CDD:459649 27/55 (49%)

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