DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and Hoxb6

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001385781.1 Gene:Hoxb6 / 497986 RGDID:1562142 Length:224 Species:Rattus norvegicus


Alignment Length:61 Identity:26/61 - (42%)
Similarity:37/61 - (60%) Gaps:0/61 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKI 71
            ||.|.|:...|..|||:.|....|.....|.|:|..:.|||.::::||||||.||:|:.|:
  Rat   147 RRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESKL 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 24/55 (44%)
Hoxb6NP_001385781.1 Homeodomain 147..203 CDD:459649 24/55 (44%)

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