DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and hoxa5

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001011405.1 Gene:hoxa5 / 496880 XenbaseID:XB-GENE-486061 Length:274 Species:Xenopus tropicalis


Alignment Length:74 Identity:26/74 - (35%)
Similarity:41/74 - (55%) Gaps:5/74 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKIGGL- 74
            :|.||.:...|..|||:.|....|.....|.|:|..:.|:|.::::||||||.||:|..|:..: 
 Frog   200 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMS 264

  Fly    75 ----GGDYK 79
                ||.::
 Frog   265 MAAAGGAFR 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 22/55 (40%)
hoxa5NP_001011405.1 Homeodomain 200..256 CDD:459649 22/55 (40%)

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