DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and E5

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_524825.1 Gene:E5 / 45396 FlyBaseID:FBgn0008646 Length:524 Species:Drosophila melanogaster


Alignment Length:223 Identity:69/223 - (30%)
Similarity:96/223 - (43%) Gaps:45/223 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKIG 72
            ||.:|.||.|:..||.:||.||:..||.....|::||..:.|||.:|:|||||||.|.::.::.|
  Fly   301 RKPKRVRTAFSPTQLLKLEHAFEGNHYVVGAERKQLAQGLSLTETQVKVWFQNRRTKHKRMQQEG 365

  Fly    73 GLGGDYK--EGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPPQSSNSLDNELKASYGTGAMSP 135
            |.|.|.|  :|:                .|..||||....|.....|       :.|| ..|..|
  Fly   366 GDGSDTKSNKGS----------------SSGGGGGGDGEDDAKHDGS-------QHSY-EDAEDP 406

  Fly   136 SRLSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHPQM--DSDNQLQQHPP---QQHAS 195
            .            |...:|.......::...|..:..|:.|.::  ....||.||..   ||:|.
  Fly   407 E------------DEDEIEEDDEDEVIDMDDYGSEMDAEEHQRLREQFQQQLAQHQQQFMQQNAG 459

  Fly   196 DPIHAGSSSHHQ--QQQQQHQQEQHNPQ 221
            :.........||  ||.|||.|:||:.|
  Fly   460 EAATLSPQQQHQLLQQHQQHLQQQHHQQ 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 27/55 (49%)
E5NP_524825.1 Homeodomain 304..360 CDD:459649 27/55 (49%)

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