DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and dlx5

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001004778.1 Gene:dlx5 / 447997 XenbaseID:XB-GENE-853057 Length:289 Species:Xenopus tropicalis


Alignment Length:235 Identity:55/235 - (23%)
Similarity:78/235 - (33%) Gaps:100/235 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKIG 72
            :|.|:.||.:::.||..|:|.||:|.|..:..|.|||..:.||:.:|::||||:|:|.:|..|  
 Frog   135 KKIRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKRSKIKKIMK-- 197

  Fly    73 GLGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPPQSSNSLDNELKASYGTGAMSPSR 137
                                            .|.|.|:..|.||:.:                 
 Frog   198 --------------------------------NGELPPEHSPSSSDPM----------------- 213

  Fly   138 LSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHPQMDSDNQLQQHP-----PQQHASDP 197
                                       :...||:.....|| .|...|..||     ||...|.|
 Frog   214 ---------------------------ACNSPQSPVVWEPQ-GSSRSLSHHPHVHSHPQASGSSP 250

  Fly   198 IHAGSSSH------------HQQQQQQHQQEQHNPQLHPG 225
                :||:            |.|..|.|...||...|..|
 Frog   251 ----ASSYLENSSVWYPTGTHLQNLQNHASLQHPLALASG 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 24/55 (44%)
dlx5NP_001004778.1 DLL_N 26..118 CDD:463567
Homeodomain 138..194 CDD:459649 24/55 (44%)
Blue background indicates that the domain is not in the aligned region.

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