Protein Alignment Pph13 and sv

DIOPT Version :10

• Sequence 1: NP_477330.1
• Gene: Pph13 / 33239
• FlyBaseID: FBgn0023489
• Length: 357
• Species: Drosophila melanogaster
• Sequence 2: NP_524633.3
• Gene: sv / 43825
• FlyBaseID: FBgn0005561
• Length: 844
• Species: Drosophila melanogaster
• Alignment Length: 323
• Identity: 65/323 - (20%)
• Similarity: 106/323 - (32%)
• Gaps: 105/323 - (32%)

  Fly    84 DLDVSYDDSAVLGQLDS-----ALG---GGGTLLPDTP------PQSSNSLDNELKASYGTGAMS 134
            |..:.||....:.|..|     |:|   |.|:|.|..|      ..|:||:..:
  Fly   530 DTSMLYDSITTISQTQSSIYTPAIGPSIGTGSLTPLVPISMHEMKLSANSIQEQ----------- 583

  Fly   135 PSRLSPNIFLNLNID-----HLGLERGGSGLSMEWSTYPPQTQAQT------------------- 175
               ..|..:..|..|     ...||...|.:..|....|..:.:.|
  Fly   584 ---TVPPFYTALAFDGNYTSMTSLENCSSLVGQEHIVMPESSDSNTLCPISTRIVPDITETNSTR 645

  Fly   176 --HPQMDSD------NQLQQHPPQQHASDPIHAGSSSHH--QQQQQQHQQEQHNPQLHPGLEFAA 230
              .|..:||      |:..:......:||.| |....||  ::|.:.:::...|...||    ::
  Fly   646 VKEPLTNSDGCSEDNNKEPEKSNSSQSSDHI-ASPHLHHIGEEQLRGNRRSNLNASTHP----SS 705

  Fly   231 SLSLDMTDGSSAYD----------EMKFLSVDVDQF-------TIDSFKADCILSMEQSQMQ--- 275
            .:.|..:.|||..:          |:. ||.:|..:       :.:.:.|.|...:..|...
  Fly   706 LIPLQPSGGSSLLNINPSENRSDVELN-LSNNVGLYSTPTVLPSFNHYSAGCSSVVPGSDYAYNP 769

  Fly   276 -------AYGGHSQLVGSSNELCLDGIGMSSFGMEEGEPKSPPSLLVLDKSLPSLSIGVEGIA 331
                   |||.:....||       |:..||:..|.|:.:||   |..|...|.::.....:|
  Fly   770 AYTQYGGAYGSYGYGTGS-------GLINSSYYYESGQTQSP---LTHDLRSPLVATRANSLA 822

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pph13	NP_477330.1	Homeodomain	11..67	CDD:459649
sv	NP_524633.3	PAX	175..299	CDD:128645