DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pph13 and zfh1

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_733401.3 Gene:zfh1 / 43650 FlyBaseID:FBgn0004606 Length:1206 Species:Drosophila melanogaster


Alignment Length:244 Identity:62/244 - (25%)
Similarity:92/244 - (37%) Gaps:55/244 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RYRTTFNTLQLQELERAFQRTHYPDVFFREE---LAVRIDLTEARVQVWFQNRRAKWRKQEKIGG 73
            |.||..|..|.|:|::.:.....|.   |:|   :|.|:.|....|||||||.|::.||.:   .
  Fly   701 RVRTAINEEQQQQLKQHYSLNARPS---RDEFRMIAARLQLDPRVVQVWFQNNRSRERKMQ---S 759

  Fly    74 LGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTP----------PQSSNSLDNE---LK 125
            ...:...||.. .:..|..|.|.:.|..|.......|.||          |.|..:|:.|   |.
  Fly   760 FQNNQAAGAAP-PMPIDSQASLTREDQPLDLSVKRDPLTPKSESSPPYIAPPSGEALNPEAINLS 823

  Fly   126 ASYGTGA-MSPSRLSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHPQMDSDNQLQQH- 188
            ..:.|.| |||:.:||:                |..::.:...||.:...:  |:||..:..|. 
  Fly   824 RKFSTSASMSPASISPS----------------SAAALYFGAAPPPSPPNS--QLDSTPRSGQAF 870

  Fly   189 ---PPQQ-HASDPIHA--------GSSSHHQQQQQQHQQEQHNPQLHPG 225
               ||.. ..|.|:.|        ..:|:|.........:.....|.||
  Fly   871 PGLPPYMLPMSLPMEALFKMRPGGDFASNHALMNSIKLPDYRGTSLSPG 919

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 21/57 (37%)
zfh1NP_733401.3 C2H2 Zn finger 291..311 CDD:275368
C2H2 Zn finger 326..346 CDD:275368
zf-H2C2_2 338..365 CDD:463886
zf-C2H2 355..377 CDD:395048
C2H2 Zn finger 357..377 CDD:275368
zf-H2C2_2 369..391 CDD:463886
Homeodomain 701..756 CDD:459649 21/57 (37%)
C2H2 Zn finger 969..989 CDD:275368
zf-H2C2_2 981..1006 CDD:463886
C2H2 Zn finger 997..1017 CDD:275368
zf-H2C2_2 1009..1034 CDD:463886
C2H2 Zn finger 1025..1042 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.