DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and Rhox4c

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001034778.1 Gene:Rhox4c / 434759 MGIID:3613386 Length:205 Species:Mus musculus


Alignment Length:74 Identity:28/74 - (37%)
Similarity:40/74 - (54%) Gaps:0/74 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKIGG 73
            :||.....|...|||||||.||:.|:.....|..||..|.::|.||:.||:.||..:|:.:...|
Mouse   127 QQRSLHYNFQWWQLQELERIFQQNHFIRAEERRHLARWIGVSETRVKRWFKKRREHFRRGQSQLG 191

  Fly    74 LGGDYKEGA 82
            :..|...|:
Mouse   192 MNDDAPVGS 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 23/55 (42%)
Rhox4cNP_001034778.1 homeodomain 129..187 CDD:238039 24/57 (42%)

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