DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and bap

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster


Alignment Length:204 Identity:53/204 - (25%)
Similarity:83/204 - (40%) Gaps:43/204 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRK- 67
            |:...:::|.|..|:..|:.||||.|.:..|.....|.|:|..:.|||.:|::||||||.|.:: 
  Fly   169 GSGLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRK 233

  Fly    68 --QEKIGGLGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPPQSSNSLDNELKASYGT 130
              |:....|.|..|...:.:.|..|.|.....: :|.|.|..|    .|...|...::|:.:|| 
  Fly   234 QIQQHEAALLGASKRVPVQVLVREDGSTTYAHM-AAPGAGHGL----DPALINIYRHQLQLAYG- 292

  Fly   131 GAMSPSRLSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHPQMDSDNQLQQHPPQQHAS 195
            |...|.                       :.|.:..:.||.:..           |..||...:|
  Fly   293 GLPLPQ-----------------------MQMPFPYFYPQHKVP-----------QPIPPPTQSS 323

  Fly   196 DPIHAGSSS 204
            ..:.|.|:|
  Fly   324 SFVTASSAS 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 24/55 (44%)
bapNP_732637.1 Homeodomain 176..232 CDD:459649 24/55 (44%)

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