Protein Alignment Pph13 and Scr

DIOPT Version :10

• Sequence 1: NP_477330.1
• Gene: Pph13 / 33239
• FlyBaseID: FBgn0023489
• Length: 357
• Species: Drosophila melanogaster
• Sequence 2: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Alignment Length: 265
• Identity: 66/265 - (24%)
• Similarity: 93/265 - (35%)
• Gaps: 76/265 - (28%)

  Fly    11 RRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKIGGLG 75
            :|.||::...|..|||:.|....|.....|.|:|..:.|||.::::||||||.||:|:.|:..:.
  Fly   325 KRQRTSYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKMASMN 389

  Fly    76 ------GDYKEGALDLDVSYDDSAVLGQLD----SALGGGGTLLPDTPPQSSNSLDNELKASYGT 130
                  |.|.......|:.....|.|...|    |..|.....|...|.|::.:      ||..:
  Fly   390 IVPYHMGPYGHPYHQFDIHPSQFAHLSAXDAWHFSGTGXRLNQLYQEPYQTAAA------ASAAS 448

  Fly   131 GAMSPSRLSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHPQMDSDNQL-------QQH 188
            |..|..               |...||..:.:......|.:.|.........|.|       .|.
  Fly   449 GYQSQD---------------GGPIGGGSVGVGGGAGGPGSLANGGSNGSGPNSLFASAASSSQA 498

  Fly   189 P-----PQQHASDPIHAGSSSHHQQQQQQHQQEQHN---------------------PQLHPGLE 227
            |     ||:..|..|          .:|||||:|.|                     |:|.  ||
  Fly   499 PDCIKYPQEFXSQVI----------IRQQHQQQQDNSMDRNQERDLKLLLETDCEPDPELQ--LE 551

  Fly   228 FAASL 232
            |.|.:
  Fly   552 FKADI 556

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pph13	NP_477330.1	Homeodomain	11..67	CDD:459649	23/55 (42%)
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	23/55 (42%)