DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and Dfd

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster


Alignment Length:261 Identity:53/261 - (20%)
Similarity:87/261 - (33%) Gaps:99/261 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKIGGLG 75
            :|.||.:...|:.|||:.|....|.....|.|:|..:.|:|.::::||||||.||:|..|:... 
  Fly   367 KRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKKDNKLPNT- 430

  Fly    76 GDYKEGALDLD------------------------------------------VSYDDSAVLGQL 98
            .:.::..:|.:                                          :..|....:|.:
  Fly   431 KNVRKKTVDANGNPTPVAKKPTKRAASKKQQQAQQQQQSQQQQTQQTPVMNECIRSDSLESIGDV 495

  Fly    99 DSALGGGGTLLPDTP------PQSSNSLDNELKASYGTGAMSPSRLSPNIFLNLNIDHLGLERGG 157
            .|:| |....:|..|      |.|...|.|  ..:.|:|..:.:..:.|..||.|          
  Fly   496 SSSL-GNPPYIPAAPETTSSYPGSQQHLSN--NNNNGSGNNNNNNNNNNSNLNNN---------- 547

  Fly   158 SGLSMEWSTYPPQTQAQTHPQMDSDNQLQQHPPQQHASDPIHAGSSSHHQQQQQQHQQEQHNPQL 222
                                  :::||:               |.::.|...|||......|.||
  Fly   548 ----------------------NNNNQM---------------GHTNLHGHLQQQQSDLMTNLQL 575

  Fly   223 H 223
            |
  Fly   576 H 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 22/55 (40%)
DfdNP_477201.1 Homeodomain 367..423 CDD:459649 22/55 (40%)

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