DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and zen

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster


Alignment Length:276 Identity:73/276 - (26%)
Similarity:106/276 - (38%) Gaps:56/276 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKIGG 73
            |.:|.||.|.::||.|||..|:...|.....|.|:|.|:.|.|.:|::||||||.|::|.  |.|
  Fly    89 KLKRSRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKD--IQG 151

  Fly    74 LGGDYKEGALDLDVSYDDSAVLGQLDSALGGG-----GTLLPDTPP-------------QSSNSL 120
             ..:.|..|.......:.||..|.:...:...     ||...:..|             |:|..:
  Fly   152 -HREPKSNAKLAQPQAEQSAHRGIVKRLMSYSQDPREGTAAAEKRPMMAVAPVNPKPDYQASQKM 215

  Fly   121 DNELKASYGTGAMSPSRLSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQT-----HPQMD 180
            ..|  ||...|..|.:.||.      .::||........:|...|:....|.:.:     |...:
  Fly   216 KTE--ASTNNGMCSSADLSE------ILEHLAQTTAAPQVSTATSSTGTSTNSASSSSSGHYSYN 272

  Fly   181 SDNQLQQHPPQQHA---------SDPIHAGSSSHHQQQQQQHQQEQHNPQLHPGLEFAASLSLDM 236
            .|..||.......|         |.||.| :.|.|...|.|.....|           |:.|:::
  Fly   273 VDLVLQSIKQDLEAAAQAWSKSKSAPILA-TQSWHPSSQSQVPTSVH-----------AAPSMNL 325

  Fly   237 TDGSSAYDEMKFLSVD 252
            :.|..|....| |||:
  Fly   326 SWGEPAAKSRK-LSVN 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 25/55 (45%)
zenNP_476793.1 Homeodomain 91..147 CDD:459649 25/55 (45%)

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