DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and zen2

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster


Alignment Length:263 Identity:65/263 - (24%)
Similarity:93/263 - (35%) Gaps:77/263 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKIGG 73
            |.:|.||.|::|||.||||.|....|.....|.|::.|:.|||.:|::||||||.|.:|...   
  Fly    42 KSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLALTERQVKIWFQNRRMKLKKSTN--- 103

  Fly    74 LGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTP--PQSSNSL--DNELKASYGTGAMS 134
                 ::||:                      |.|....|  .|||..|  |:::          
  Fly   104 -----RKGAI----------------------GALTTSIPLSSQSSEDLQKDDQI---------- 131

  Fly   135 PSRLSPNIFLNLNIDHLGLERGGSGLSMEWSTYPP-QTQAQTHPQMDSDNQLQQHPPQQHASD-- 196
            ..||..  :.|.|::...|.:...|:..|....|| |:....|........|.|.|..:..::  
  Fly   132 VERLLR--YANTNVETAPLRQVDHGVLEEGQITPPYQSYDYLHEFSPEPMALPQLPFNEFDANWA 194

  Fly   197 ----------PIHAGSSSHHQQQQQQHQQEQHNPQLHPGLEFAASLSLDMTDGSSAYDEMKFLSV 251
                      ||......|:.|.|...|                  :......||:......|.|
  Fly   195 SSWLGLEPTIPIAENVIEHNTQDQPMIQ------------------NFCWDSNSSSASSSDILDV 241

  Fly   252 DVD 254
            |.|
  Fly   242 DYD 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 27/55 (49%)
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 27/55 (49%)

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