DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and prrx1a

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_999899.1 Gene:prrx1a / 406431 ZFINID:ZDB-GENE-020905-5 Length:245 Species:Danio rerio


Alignment Length:175 Identity:66/175 - (37%)
Similarity:91/175 - (52%) Gaps:45/175 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKI 71
            ||||||.|||||:.|||.|||.|:||||||.|.||:||.|::||||||||||||||||:|:.|: 
Zfish    93 KRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNER- 156

  Fly    72 GGLGGDYKEGALDLDVSYDDSAVLGQLDSAL----GGGGT-----LLPDTPPQSSNSLDNELKAS 127
                                 |:|...:::|    .|..|     ::|...|:.::.|      |
Zfish   157 ---------------------AMLASKNASLLKSFSGEVTAVEQPIVPRPAPRPNDYL------S 194

  Fly   128 YGTGAMSPS-----RLSPNIFLNLNIDHLGLERGGSGLSMEWSTY 167
            :|:   |||     ..||:...|.....:.:....:.|.::...|
Zfish   195 WGS---SPSYSAMATYSPSCANNTTAQGMNMANSIANLRLKAKEY 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 42/55 (76%)
prrx1aNP_999899.1 Homeodomain 101..153 CDD:459649 39/51 (76%)
OAR 220..237 CDD:461067 2/17 (12%)

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