Protein Alignment Pph13 and lms

DIOPT Version :10

• Sequence 1: NP_477330.1
• Gene: Pph13 / 33239
• FlyBaseID: FBgn0023489
• Length: 357
• Species: Drosophila melanogaster
• Sequence 2: NP_611491.2
• Gene: lms / 37322
• FlyBaseID: FBgn0034520
• Length: 378
• Species: Drosophila melanogaster
• Alignment Length: 282
• Identity: 68/282 - (24%)
• Similarity: 110/282 - (39%)
• Gaps: 83/282 - (29%)

  Fly     9 KQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRK------ 67
            :::|.||.|:..|::.||..|:|..|..|..|..||.::.|||.::::||||||.||::
  Fly    85 RKKRPRTAFSAAQIKALETEFERGKYLSVAKRTALAKQLQLTETQIKIWFQNRRTKWKRKYTSDV 149

  Fly    68 ---------QEKIGGLGGDYKEG-----------------ALDLDVSYDDSAVLGQLDSALG--- 103
                     |..||||......|                 ::.|:.| ..:|.:....:|.|
  Fly   150 ETLASHYYAQLGIGGLARPMVVGDRLWLFSQTPTGPTPIQSIMLNGS-GSAAPMASATTATGSPM 213

  Fly   104 -----GGGTLLPDTP-PQSSNSLDNELKA---------SYGTGAMSPS----------RLSPNIF 143
                 .||  :|..| |....|..|.:.|         .:|. |..|:          |..|  :
  Fly   214 RPYATSGG--MPPLPGPSVMESARNAILARGQPLNFALPFGV-AKPPAGGVPAASYIPRCKP--Y 273

  Fly   144 LNLNIDH-LGLERGGSGLSMEWSTYPPQTQAQTHPQM--------DSD-NQLQQHPPQQHASDPI 198
            ....:|: ..|....|.|.|:::|.||:.::.....:        |:: |.|||.      |.|:
  Fly   274 ATSYVDYAASLPTNESYLQMKYATLPPEAESGASNGLAELERVFGDANANFLQQR------STPV 332

  Fly   199 HAGSSSHHQQQQQQHQQEQHNP 220
             ||:::.:........|....|
  Fly   333 -AGTATAYGHDGLNQAQRSRRP 353

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pph13	NP_477330.1	Homeodomain	11..67	CDD:459649	25/55 (45%)
lms	NP_611491.2	Cnd2	33..>106	CDD:450400	7/20 (35%)
		Homeodomain	87..143	CDD:459649	25/55 (45%)