DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and Gsc2

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001102316.1 Gene:Gsc2 / 363831 RGDID:1305333 Length:214 Species:Rattus norvegicus


Alignment Length:65 Identity:38/65 - (58%)
Similarity:48/65 - (73%) Gaps:0/65 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKI 71
            :|:.||:||.|:..|||.||..|.:..||||..||.|||||.|.|.||:|||:|||||||.|:::
  Rat   133 QRRTRRHRTIFSEEQLQALEALFVQNQYPDVGTRERLAVRIRLREERVEVWFKNRRAKWRHQKRV 197

  Fly    72  71
              Rat   198  197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 35/55 (64%)
Gsc2NP_001102316.1 Homeodomain 137..193 CDD:459649 35/55 (64%)

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