DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and unpg

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_477146.1 Gene:unpg / 35942 FlyBaseID:FBgn0015561 Length:485 Species:Drosophila melanogaster


Alignment Length:143 Identity:51/143 - (35%)
Similarity:70/143 - (48%) Gaps:21/143 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKIG- 72
            |.||.||.|.:.||.||||.|....|..:..|.::|..:.|:|.:|::||||||||| |:.|.| 
  Fly   318 KSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWFQNRRAKW-KRVKAGL 381

  Fly    73 ---GLGGDYKEG-------ALDLDVSYDDSAVLG---QLDSALGGGGTLLPDTPPQ-SSNSLDNE 123
               |||   :.|       .:.:.|..:..||..   ||:.....|..  ||...: |:.::...
  Fly   382 TSHGLG---RNGTTSGTKIVVPIPVHVNRFAVRSQHQQLEKMCLSGPK--PDLRKKLSAEAIGGF 441

  Fly   124 LKASYGTGAMSPS 136
            .|.|..|.|.|||
  Fly   442 EKFSGSTNASSPS 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 27/55 (49%)
unpgNP_477146.1 Homeodomain 324..376 CDD:459649 24/52 (46%)

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