Protein Alignment Pph13 and cad

DIOPT Version :10

• Sequence 1: NP_477330.1
• Gene: Pph13 / 33239
• FlyBaseID: FBgn0023489
• Length: 357
• Species: Drosophila melanogaster
• Sequence 2: NP_001260641.1
• Gene: cad / 35341
• FlyBaseID: FBgn0000251
• Length: 445
• Species: Drosophila melanogaster
• Alignment Length: 218
• Identity: 56/218 - (25%)
• Similarity: 83/218 - (38%)
• Gaps: 68/218 - (31%)

  Fly     1 MDKGTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKW 65
            :|.....|.:.:||..:...|..|||:.:..:.|..:..:.|||..:.|:|.:|::||||||||.
  Fly   282 LDASGKTRTKDKYRVVYTDFQRLELEKEYCTSRYITIRRKSELAQTLSLSERQVKIWFQNRRAKE 346

  Fly    66 RKQEKIGGLGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPPQSSNSLDNELKASYGT 130
            |||.|.|.                         |..:.|.|....|    .|..||
  Fly   347 RKQNKKGS-------------------------DPNVMGVGVQHAD----YSQLLD--------- 373

  Fly   131 GAMSPSRLSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHPQMDSDNQLQQHPPQQHAS 195
               :.::|.|.:.|:.::.|          ||.     |.. |...|.|      :.||   |.:
  Fly   374 ---AKAKLEPGLHLSHSLAH----------SMN-----PMA-AMNIPAM------RLHP---HLA 410

  Fly   196 DPIH--AGSSSHHQQQQQQHQQE 216
            ...|  |..::|..|.||||..:
  Fly   411 AHSHSLAAVAAHSHQLQQQHSAQ 433

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pph13	NP_477330.1	Homeodomain	11..67	CDD:459649	21/55 (38%)
cad	NP_001260641.1	Homeodomain	293..348	CDD:459649	21/54 (39%)