Protein Alignment Pph13 and tup

DIOPT Version :10

• Sequence 1: NP_477330.1
• Gene: Pph13 / 33239
• FlyBaseID: FBgn0023489
• Length: 357
• Species: Drosophila melanogaster
• Sequence 2: NP_476775.1
• Gene: tup / 35147
• FlyBaseID: FBgn0003896
• Length: 534
• Species: Drosophila melanogaster
• Alignment Length: 366
• Identity: 87/366 - (23%)
• Similarity: 120/366 - (32%)
• Gaps: 122/366 - (33%)

  Fly     4 GTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRK- 67
            |....|..|.||..|..||..|...:.....||...:|:|.....|:...::|||||:|.|.:|
  Fly   235 GPSDGKPTRVRTVLNEKQLHTLRTCYNANPRPDALMKEQLVEMTSLSPRVIRVWFQNKRCKDKKK 299

  Fly    68 ---------QEKIG-GLGGDYKEG---ALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPPQSSNS 119
                     |||.| .||....:|   .....|.:|....|..||..     |..|.....|..:
  Fly   300 TIQMKLQMQQEKEGRKLGYGAMQGIPMIASSPVRHDSPLNLQGLDVQ-----TYQPPWKALSDFA 359

  Fly   120 LDNELKASYGTGAMSPSRLSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHPQMDSDNQ 184
            |..:|.::......:|:      |..|.....|.:..|..:      .||  ...:||
  Fly   360 LHADLDSNGAINTHTPA------FQQLVNQMHGYDLNGMPI------LPP--HPHSHP------- 403

  Fly   185 LQQHPPQQHASDPIHAGSSSHHQQQQQQHQQEQHNPQLHPGLEFAASLSLDMT-----DGSSAYD 244
             .|.||.||...|   |...:||.||         |...||   .:||...:|     |.:.:|
  Fly   404 -AQGPPHQHPPPP---GGPHNHQNQQ---------PNQQPG---GSSLDSGITSHHHPDSTDSY- 451

  Fly   245 EMKFLSVDVDQFTIDSFKADCILSMEQSQMQAYGGHSQLVGSSNELCLDGIGMSSFGMEEGEPKS 309
             :.:|..|                 ::|::       .|..||:.....|..:|          |
  Fly   452 -VTYLESD-----------------DKSKL-------ALTPSSSSSASAGTSIS----------S 481

  Fly   310 PPSLLVLDKSLPSLSIGVEGIADLVEQLHHHQHEGGPVGGG 350
            |||           .:|..|              ||.||||
  Fly   482 PPS-----------GVGAGG--------------GGAVGGG 497

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pph13	NP_477330.1	Homeodomain	11..67	CDD:459649	19/55 (35%)
tup	NP_476775.1	LIM1_Isl	54..108	CDD:188752
		LIM2_Isl	116..171	CDD:188760
		HOX	241..297	CDD:197696	19/55 (35%)