DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pph13 and HOXB3

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:XP_016880049.1 Gene:HOXB3 / 3213 HGNCID:5114 Length:578 Species:Homo sapiens


Alignment Length:262 Identity:66/262 - (25%)
Similarity:101/262 - (38%) Gaps:72/262 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKIGGL- 74
            :|.||.:.:.||.|||:.|....|.....|.|:|..::|:|.::::||||||.|::|.:|..|| 
Human   336 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKGLA 400

  Fly    75 ---GGDYKEG--------------AL-DLDVSYDDS-------------AVLGQLDSALGGGGT- 107
               ||....|              || .:..||:..             |:.......|.|.|. 
Human   401 SSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYESPSPPAFGKAHQNAYALPSNYQPPLKGCGAP 465

  Fly   108 -LLPDTP-PQSSNSLDNELKASYGTGAMS---------------PSRLSPNIFLNLNIDHLGLER 155
             ..|.|| |:....:......:|||..|.               |....|:::   .::||....
Human   466 QKYPPTPAPEYEPHVLQANGGAYGTPTMQGSPVYVGGGGYADPLPPPAGPSLY---GLNHLSHHP 527

  Fly   156 GGSGLSMEWSTYPPQTQAQTHPQMDSDNQLQQHPPQQHASDPIHAGSSSHHQQQQQQHQQEQHNP 220
            .|   :::::..||...:|.|           .|.:.|   |.:...||||....|...||.  |
Human   528 SG---NLDYNGAPPMAPSQHH-----------GPCEPH---PTYTDLSSHHAPPPQGRIQEA--P 573

  Fly   221 QL 222
            :|
Human   574 KL 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 22/55 (40%)
HOXB3XP_016880049.1 Homeodomain 336..392 CDD:459649 22/55 (40%)
DUF4074 513..576 CDD:463833 20/85 (24%)

Return to query results.
Submit another query.