DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pph13 and CG11294

DIOPT Version :9

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001259352.1 Gene:CG11294 / 31807 FlyBaseID:FBgn0030058 Length:261 Species:Drosophila melanogaster


Alignment Length:279 Identity:99/279 - (35%)
Similarity:125/279 - (44%) Gaps:59/279 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKI 71
            :|:|||.||||...||||||..||:|||||||.|||:|:||.|:||||||||||||||||||.::
  Fly    21 RRRQRRNRTTFTPQQLQELEALFQKTHYPDVFLREEVALRISLSEARVQVWFQNRRAKWRKQARL 85

  Fly    72 GGLGGDYKEGALDLDVSYDDSAVL--GQLDSALGGGGTLLP--DTPPQ-SSNSLDNELKASYGTG 131
            ..|...::...|.|..    ..|:  |.:....|.|.|..|  .||.. ||.|.|:|| |..|.|
  Fly    86 QLLQDAWRMRCLSLGT----PPVMGGGAVQGGSGNGATARPPSQTPENLSSASKDSEL-AEVGNG 145

  Fly   132 AMSPSRLSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHPQMDSDNQLQQHPPQQHASD 196
                    ||              .||...|             ||.....:|.|||...|.|:|
  Fly   146 --------PN--------------SGSFTMM-------------HPAFQQQHQQQQHQGHQQATD 175

  Fly   197 PIHAGSSSHHQQQQQQHQQEQHNPQLHPGLEFA--ASLSLDMTDGSSAYDEMKFLSVDVDQFTID 259
               ....|....:.:.::...|      |:|..  |:||....:||...|..:   :|:......
  Fly   176 ---QDKLSKTYTELKLYKAPSH------GMELGGMAALSGHSDEGSDGSDSEE---IDLTSGACI 228

  Fly   260 SFKADCILSMEQSQMQAYG 278
            .|.....|..:|.|.|..|
  Fly   229 DFSQSSKLQQQQQQQQQQG 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeobox 14..66 CDD:278475 40/51 (78%)
CG11294NP_001259352.1 Homeobox 29..80 CDD:278475 39/50 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451207
Domainoid 1 1.000 55 1.000 Domainoid score I4097
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000011
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24329
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.940

Return to query results.
Submit another query.