Protein Alignment Pph13 and Vsx1

DIOPT Version :9

• Sequence 1: NP_477330.1
• Gene: Pph13 / 33239
• FlyBaseID: FBgn0023489
• Length: 357
• Species: Drosophila melanogaster
• Sequence 2: NP_001284898.1
• Gene: Vsx1 / 31470
• FlyBaseID: FBgn0263511
• Length: 837
• Species: Drosophila melanogaster
• Alignment Length: 365
• Identity: 106/365 - (29%)
• Similarity: 140/365 - (38%)
• Gaps: 94/365 - (25%)

  Fly     4 GTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQ 68
            |..|.|:|..||.|.:.||:|||:||:..|||||..||.|:::..|.|.|:|||:|||||||||.
  Fly   389 GKKKNKRRHGRTIFTSSQLEELEKAFKEAHYPDVSARELLSMKTGLAEDRIQVWYQNRRAKWRKT 453

  Fly    69 EKIG---------GLGGDYKEGALDLDVSYDDSA---------VLGQLDSALGGGGTLLPDTPPQ 115
            ||..         ||.|.....:|.|..:...||         :||....:|.....|..|...:
  Fly   454 EKCWGHSTKMAEYGLYGAMVRHSLPLPETIIKSAKEDESVAPWLLGMHKKSLEAAELLKSDESDR 518

  Fly   116 SSNSLDNELKASYGTGAMSPSRLSPNIFLNLNIDHLGLE--------RGGSGLSMEWSTYPPQTQ 172
            .:.:.| :...||..|:...|.:|     :.:|..|..:        .||.|.......:.....
  Fly   519 ETPTSD-DTNTSYSAGSTHNSPIS-----SFSISRLLFDAPPPAAGSAGGKGHHHHHHHHKGHHH 577

  Fly   173 AQTHPQMDSDNQLQQHPPQQHASDPIHAGSSSHHQQQQQQHQQEQHNPQLHPGLEFAASLSLDMT 237
            |..|.|           .|.||...:|     |.||||||.||:||:..||     ||..||
  Fly   578 AHVHAQ-----------AQAHAHMLLH-----HQQQQQQQQQQQQHHHHLH-----AAENSL--- 618

  Fly   238 DGSSAYDEMKFLSVDVDQFTIDSFKADCILSMEQSQMQAYGGHSQLVGSSNELCLDGIGMSSFGM 302
                                            :|.|:...|..|   ||.:.   .|.|..|.|.
  Fly   619 --------------------------------QQQQVAGTGSGS---GSGSG---SGTGAGSTGP 645

  Fly   303 EEGEPKSPPSLLVLDKSLPSLSIGVEGIADLVEQLHHHQH 342
            ....|.:....|...:.|.......:..|...:|.|||||
  Fly   646 PAHHPYNQQQHLHHLQQLQQQQQQQQQQAQQQQQHHHHQH 685

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pph13	NP_477330.1	Homeobox	14..66	CDD:278475	30/51 (59%)
Vsx1	NP_001284898.1	Homeobox	399..451	CDD:278475	30/51 (59%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45450964
Domainoid	1	1.000	55	1.000	Domainoid score	I4097
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.840