DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and VSX1

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_055403.2 Gene:VSX1 / 30813 HGNCID:12723 Length:365 Species:Homo sapiens


Alignment Length:188 Identity:67/188 - (35%)
Similarity:93/188 - (49%) Gaps:24/188 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKI 71
            |||:||:||.|...||:|||:||...|||||:.||.|||:.:|.|.|:|||||||||||||:||.
Human   161 KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKR 225

  Fly    72 GGLGGDYKE----GALDLD-VSYDDSAVLGQLDSALGGGGTLLPDTPP-------QSSNSL---- 120
            .|......|    ||:... :...||.    |:||.||   ||....|       :|...:    
Human   226 WGGSSVMAEYGLYGAMVRHCIPLPDSV----LNSAEGG---LLGSCAPWLLGMHKKSMGMIRKPG 283

  Fly   121 -DNELKASYGTGAMSPSRLSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHP 177
             :::|...:|:..................|.:..|.|...::::.|:...|...:.||
Human   284 SEDKLAGLWGSDHFKEGSSQSESGSQRGSDKVSPENGLEDVAIDLSSSARQETKKVHP 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 36/55 (65%)
VSX1NP_055403.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37
Octapeptide motif 31..38
PRK14959 <47..>149 CDD:184923
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 113..167 4/5 (80%)
Nuclear localization signal. /evidence=ECO:0000255 161..166 3/4 (75%)
Homeodomain 165..221 CDD:459649 36/55 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 290..365 8/52 (15%)
Blue background indicates that the domain is not in the aligned region.

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