DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pph13 and dlx3b

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_571397.2 Gene:dlx3b / 30585 ZFINID:ZDB-GENE-980526-280 Length:269 Species:Danio rerio


Alignment Length:218 Identity:56/218 - (25%)
Similarity:86/218 - (39%) Gaps:80/218 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKIG 72
            :|.|:.||.:::.||..|:|.||:..|..:..|.|||.::.||:.:|::||||||:|::|.    
Zfish   123 KKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKL---- 183

  Fly    73 GLGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPPQSSNSLDNELKASYGTGAMSPSR 137
                 ||.|.:.|:.|                         |.:|:|:          ...||. 
Zfish   184 -----YKNGEVPLEHS-------------------------PNASDSM----------ACNSPP- 207

  Fly   138 LSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHPQMDSDNQLQQHPPQQHASDPIHAGS 202
             ||.::.|                            ..|....:..|:.| ||.  :|.|.:...
Zfish   208 -SPAVWDN----------------------------NAHSSQVNRGQIPQ-PPL--SSTPPYMED 240

  Fly   203 SSHHQQQQQQHQQEQHNPQLHPG 225
            .|:|..||..|.|   :|..|||
Zfish   241 YSNHWYQQGSHLQ---HPVHHPG 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 24/55 (44%)
dlx3bNP_571397.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41
DLL_N 28..104 CDD:463567
Homeodomain 126..182 CDD:459649 24/55 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 191..242 17/118 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 250..269 6/14 (43%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.