Protein Alignment Pph13 and pax3a

DIOPT Version :10

• Sequence 1: NP_477330.1
• Gene: Pph13 / 33239
• FlyBaseID: FBgn0023489
• Length: 357
• Species: Drosophila melanogaster
• Sequence 2: NP_571352.1
• Gene: pax3a / 30532
• ZFINID: ZDB-GENE-980526-52
• Length: 509
• Species: Danio rerio
• Alignment Length: 345
• Identity: 97/345 - (28%)
• Similarity: 129/345 - (37%)
• Gaps: 134/345 - (38%)

  Fly     6 MKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEK 70
            :||||||.||||...||:||||||:||||||::.|||||.|..||||||||||.||||:||||
Zfish   216 LKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ-- 278

  Fly    71 IGGLGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPPQSSNSLDNELKASYGTGAMSP 135
                     .||..|..          .:..:.||      .||.:.:||             .|
Zfish   279 ---------AGANQLMA----------FNHLIPGG------FPPSAMSSL-------------QP 305

  Fly   136 SRLSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHPQMDSDNQLQQHPPQQHASDPIHA 200
            .:|:.                        |.|||.:.:|...|..:.::.|..||.......:.:
Zfish   306 YQLAD------------------------SPYPPSSISQVSEQPSTVHRPQPLPPTSVHQSGLGS 346

  Fly   201 GSSSHHQQQQQQHQQEQHNPQLHPGLEFAASLSLDMTDGSSAYDEMKFLSVDVDQFTIDSFKADC 265
            |                      ||.:          :|||||                     |
Zfish   347 G----------------------PGAQ----------EGSSAY---------------------C 358

  Fly   266 ILSMEQSQMQAYG-------GHSQLVGS--SNELCLDGIGMSSFGMEEGEPKSPPSLLVLDKSLP 321
             ||..:.....|.       ||:..|..  ||.|....:|:.:.|....:|:|       |.:|.
Zfish   359 -LSSGRHGFSGYSDGYVAAPGHANPVNPSISNGLPSQVMGLLNPGAVPHQPQS-------DFALS 415

  Fly   322 SLSIGVEGIADLVEQLHHHQ 341
            .|:.|:|....:....|..|
Zfish   416 PLTGGLEPSTGMPASCHSSQ 435

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pph13	NP_477330.1	Homeodomain	11..67	CDD:459649	41/55 (75%)
pax3a	NP_571352.1	PAX	34..159	CDD:128645
		Homeodomain	221..277	CDD:459649	41/55 (75%)
		Pax7	350..394	CDD:403540	15/75 (20%)