DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and otx2b

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_571326.1 Gene:otx2b / 30501 ZFINID:ZDB-GENE-980526-406 Length:289 Species:Danio rerio


Alignment Length:292 Identity:88/292 - (30%)
Similarity:124/292 - (42%) Gaps:73/292 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKIG 72
            |||||.||||...||..||..|.:|.|||:|.|||:|::|:|.|:||||||:|||||.|:|::..
Zfish    36 RKQRRERTTFTRAQLDVLEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQQQ 100

  Fly    73 GLGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPPQSSNSLDNELKASYGTGAMSPSR 137
            ..||..|     :..:...|:...:..|..|..|..   ||| ||.|:......:......||:.
Zfish   101 QNGGQNK-----VRPAKKKSSPAREASSESGASGQF---TPP-SSTSVPAISTTTAPVSIWSPAS 156

  Fly   138 LSPNIFLNLNIDHLGLERGGSGLSMEWSTYP-PQTQAQTHPQ-----------MDSDNQLQQHPP 190
            :||          |......|...|:.| || ..|||..:.|           ||..:.|   .|
Zfish   157 ISP----------LSDPLSTSSSCMQRS-YPMTYTQASGYSQGYAGSTSYFGGMDCGSYL---TP 207

  Fly   191 QQH-------ASDPIHAGSSSHHQQQQQQHQQEQHNPQLHP-------GLEFAASLS-LDMTDGS 240
            ..|       ...|:.:.:.:.|..|         :|...|       ||.|.::.. ||..|.:
Zfish   208 MHHQLTGPGSTLSPMSSNAVTSHLNQ---------SPASLPTQGYGASGLGFNSTADCLDYKDQA 263

  Fly   241 SAYDEMKFLSVDVDQFTIDSFKADCILSMEQS 272
            |::..              :|.|||:...:|:
Zfish   264 SSWKL--------------NFNADCLDYKDQT 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 34/55 (62%)
otx2bNP_571326.1 Homeodomain 39..94 CDD:459649 34/54 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..142 15/57 (26%)
TF_Otx 153..234 CDD:427350 22/103 (21%)

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