DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and otx1

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_571325.2 Gene:otx1 / 30500 ZFINID:ZDB-GENE-980526-400 Length:323 Species:Danio rerio


Alignment Length:297 Identity:89/297 - (29%)
Similarity:126/297 - (42%) Gaps:76/297 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKIG 72
            |||||.||||...||..||..|.:|.|||:|.|||:|::|:|.|:||||||:|||||.|:|::.|
Zfish    36 RKQRRERTTFTRSQLDILEALFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSG 100

  Fly    73 G---LGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPP---------QSSNSLDNELK 125
            .   .....|:.:...:.:..:|:  ||.             |||         .||:|.:|...
Zfish   101 SSTKTRPAKKKSSPTRESTGSESS--GQF-------------TPPAVSSAGSSSSSSSSTNNTGI 150

  Fly   126 ASYGTG----------AMSPSRLSPNIFL-------NLNIDHLGLERGGSGLSMEWSTYP-PQTQ 172
            .|..|.          |:||....|::.|       |.:.    ::|..||.:.  |||| |..|
Zfish   151 CSTSTSISTVSSIWSPAISPGSAPPSVSLPEPVAPSNTSC----MQRSVSGTAS--STYPMPYNQ 209

  Fly   173 AQTHPQ---------------------MDSDNQLQQHPPQQHASDPIHAGSSSHH-QQQQQQHQQ 215
            ...:.|                     |.|.:...|..|...:|.|.|   ..|| .|....|..
Zfish   210 TTGYSQGYPTPSGSYFSGVDCGSYLAPMHSHHHPHQLSPMTASSMPTH---PHHHISQSSGHHHH 271

  Fly   216 EQHNPQLHPGLEFAASLSLDMTDGSSAYDEMKFLSVD 252
            ..|......||.|.:|..||..:.:::..::.|.:.|
Zfish   272 HHHQAYSGTGLAFNSSDCLDYKEQTASSWKLNFNTTD 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 34/55 (62%)
otx1NP_571325.2 Homeodomain 39..95 CDD:459649 34/55 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..155 17/78 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 168..204 10/41 (24%)
TF_Otx 172..258 CDD:427350 20/94 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 239..277 11/40 (28%)

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