DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and otx2a

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:XP_073764513.1 Gene:otx2a / 30462 ZFINID:ZDB-GENE-980526-27 Length:364 Species:Danio rerio


Alignment Length:342 Identity:92/342 - (26%)
Similarity:129/342 - (37%) Gaps:117/342 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQE 69
            |..|||||.||||...||..||..|.:|.|||:|.|||:|::|:|.|:||||||:|||||.|:|:
Zfish    59 TNPRKQRRERTTFTRTQLDILESLFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQ 123

  Fly    70 KIGGL----------------------GGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTL---- 108
            :....                      .|.:...|:. ..|...|:..|...|||.|.|.:    
Zfish   124 QQSSTNSKIRPAKKKPSPSRESPGSESSGHFTPPAVS-SSSSSSSSSSGSNPSALSGVGLISSSS 187

  Fly   109 ----------------------LPD-TPPQSSNSLDNELKASYGTGAMSPSRLSPNIFLNLNIDH 150
                                  ||| :||.|::.:...:.:..||..: ||              
Zfish   188 SGTPVPSIWSPAPVSPVPAPPSLPDISPPASASCMQRAMSSGGGTTGV-PS-------------- 237

  Fly   151 LGLERGGSGLSMEWSTYP-PQTQAQTHPQ-------------MDSDNQL------QQHPPQQHAS 195
                            || |..||.::.|             ||..:.|      ..|.|..|.|
Zfish   238 ----------------YPMPYNQAPSYAQGYPTSNAASYFGGMDCGSYLAPMTGHAHHHPHAHHS 286

  Fly   196 DPIHAGSSSHHQQQQQQHQQEQHNPQLHPG-----LEFAASLSLDMTDGSSAYDEMKFLSVDVDQ 255
            ....|.:.|.|.......|...|:|. |.|     |.|::|..||..:..::..::.|       
Zfish   287 QLSTAAAVSGHHHPHHIGQSSGHHPH-HQGYGGTALPFSSSDCLDYKEQVASSWKLNF------- 343

  Fly   256 FTIDSFKADCILSMEQS 272
               .|..|||:...:|:
Zfish   344 ---SSAAADCLDYKDQA 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 34/55 (62%)
otx2aXP_073764513.1 None

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