Protein Alignment Pph13 and Hoxb3

DIOPT Version :10

• Sequence 1: NP_477330.1
• Gene: Pph13 / 33239
• FlyBaseID: FBgn0023489
• Length: 357
• Species: Drosophila melanogaster
• Sequence 2: NP_001100512.1
• Gene: Hoxb3 / 303488
• RGDID: 1310780
• Length: 429
• Species: Rattus norvegicus
• Alignment Length: 257
• Identity: 67/257 - (26%)
• Similarity: 96/257 - (37%)
• Gaps: 74/257 - (28%)

  Fly    11 RRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKIGGL- 74
            :|.||.:.:.||.|||:.|....|.....|.|:|..::|:|.::::||||||.|::|.:|..||
  Rat   188 KRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLSERQIKIWFQNRRMKYKKDQKAKGLA 252

  Fly    75 ---GGDYKEG--------------AL-DLDVSYDDS-------------AVLGQLDSALGGGGT- 107
               ||....|              || .:..|||..             |:.......|.|.|.
  Rat   253 SSSGGPSPAGSPPQPMQSTAGFMNALHSMTPSYDSPSPPAFSKGHQNAYALPSNYQPPLKGCGAP 317

  Fly   108 -LLPDTP-PQSSNSLDNELKASYGTGAMSPSRLSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQ 170
             ..|.|| |:..:.:......:|||..|..|    .:::           ||.|.:   ...||
  Rat   318 QKYPPTPAPEYESHVLQANGGAYGTPTMQGS----PVYV-----------GGGGYA---DPLPP- 363

  Fly   171 TQAQTHPQMDSDNQLQQHP-------------PQQHAS----DPIHAGSSSHHQQQQQQHQQ 215
               ...|.:...|.|..||             |.||..    .|.:...||||...|.:.|:
  Rat   364 ---PAGPSLYGLNHLSHHPSGNLDYNGAAPMAPGQHHGPCDPHPTYTDLSSHHAPPQGRIQE 422

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pph13	NP_477330.1	Homeodomain	11..67	CDD:459649	22/55 (40%)
Hoxb3	NP_001100512.1	Homeodomain	188..244	CDD:459649	22/55 (40%)
		DUF4074	365..427	CDD:463833	15/58 (26%)