DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and noto

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_571130.1 Gene:noto / 30260 ZFINID:ZDB-GENE-990415-75 Length:241 Species:Danio rerio


Alignment Length:107 Identity:42/107 - (39%)
Similarity:53/107 - (49%) Gaps:24/107 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQE---- 69
            |.:|.||:|...||..||:.|.|..|.....|..||..:.||||:|:|||||||.|||||.    
Zfish   133 KSKRMRTSFTNDQLSRLEKEFARQQYMVGSERFLLASALQLTEAQVKVWFQNRRIKWRKQSLEQQ 197

  Fly    70 --KIGGLG-----------------GDYKEGALDLDVSYDDS 92
              |:..||                 .|:.|.: |:|:..|||
Zfish   198 QAKLAKLGLTVPPKSPGSQGREDEERDFTEES-DVDIDIDDS 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 28/55 (51%)
notoNP_571130.1 COG5576 79..>193 CDD:227863 31/59 (53%)
Homeodomain 135..191 CDD:459649 28/55 (51%)

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