DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and mixl1

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_571015.3 Gene:mixl1 / 30115 ZFINID:ZDB-GENE-000208-20 Length:327 Species:Danio rerio


Alignment Length:293 Identity:69/293 - (23%)
Similarity:106/293 - (36%) Gaps:94/293 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 RRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKIGGLG 75
            ||.||.|...|:..||:.:..|.|||::.||:|.....|.|:|:||||||||||.|:|       
Zfish    59 RRKRTNFTQQQIDVLEKVYLDTKYPDIYLREKLEALTGLPESRIQVWFQNRRAKSRRQ------- 116

  Fly    76 GDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPD-------TPPQSSNSLDN----------- 122
                     :.:|..:..          .|..|.|:       |..|:.:.|:|           
Zfish   117 ---------VGISIPNKT----------SGNILTPNNLLMHQFTTHQNHSGLENLQRTSTFTADS 162

  Fly   123 ---------ELKASYGTGAMSPSRLSPNIFLN-----LNIDHLGLERGGSGLSMEWSTYPPQTQA 173
                     |.|.|...|.:......|.:|..     :..|||.:....|....    ||.:.:.
Zfish   163 FHQQLINSSEEKISTIKGDIYDPTTIPCMFSRTQENPIKTDHLSVVVPRSYTQQ----YPKEHEQ 223

  Fly   174 QTHPQMDSDNQLQQH---------------------PPQQHASDPIHAGSSSHHQQQQQQHQQEQ 217
            .||....:.:.::|.                     ||....|:.:.:.||..|.....|:...|
Zfish   224 FTHSANHAKSTMKQFLVEYDNFPPNKTIGPEMKVVIPPLPSQSNFMMSSSSPKHIACSVQNMSVQ 288

  Fly   218 HNPQLHPGLEFA------ASLSLDMTDGSSAYD 244
            ..|:|     ||      ||.:::.:|..|.::
Zfish   289 TQPEL-----FATFSPIRASEAVEFSDSDSDWE 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 28/55 (51%)
mixl1NP_571015.3 Homeodomain 59..115 CDD:459649 28/55 (51%)

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