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Protein Alignment Pph13 and Alx4
DIOPT Version :9
Sequence 1: | NP_477330.1 |
Gene: | Pph13 / 33239 |
FlyBaseID: | FBgn0023489 |
Length: | 357 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001100023.1 |
Gene: | Alx4 / 296511 |
RGDID: | 1310201 |
Length: | 399 |
Species: | Rattus norvegicus |
Alignment Length: | 185 |
Identity: | 66/185 - (35%) |
Similarity: | 94/185 - (50%) |
Gaps: | 41/185 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 DKGTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWR 66
|..:.|.|:||.||||.:.||:|||:.||:||||||:.||:||:|.|||||||||||||||||||
Rat 194 DSESSKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQLAMRTDLTEARVQVWFQNRRAKWR 258
Fly 67 KQEKIGGLGGDYKEGALDLDVSYD-------DSAVLGQLDSALGGGGTLLP-------------- 110
|:|:.|.: ::.......:|: ::....|..|.:|..|...|
Rat 259 KRERFGQM----QQVRTHFSTAYELPLLTRAENYAQIQNPSWIGNNGAASPVPACVVPCDPVPAC 319
Fly 111 ----DTPPQSSNSLDNELKASYGTGAMSPSRLSPNIFLNLNIDHLGLERGGSGLS 161
..||.|..|..::..:..|.|: ::...|:|...|.:|:|
Rat 320 MSPHAHPPGSGASSVSDFLSVSGAGS------------HVGQTHMGSLFGAAGIS 362
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Pph13 | NP_477330.1 |
Homeobox |
14..66 |
CDD:278475 |
39/51 (76%) |
Alx4 | NP_001100023.1 |
Homeobox |
206..258 |
CDD:278475 |
39/51 (76%) |
OAR |
375..392 |
CDD:281777 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D454642at33208 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm45998 |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR24329 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
1 |
1.000 |
- |
- |
|
X469 |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
6 | 6.020 |
|
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