DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and Mixl1

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:XP_063128236.1 Gene:Mixl1 / 289311 RGDID:1310011 Length:245 Species:Rattus norvegicus


Alignment Length:130 Identity:45/130 - (34%)
Similarity:63/130 - (48%) Gaps:40/130 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARV--------------QVWFQN 60
            |||.||:|::.|||.||..|::|.|||:..||.||....|.|:|:              ||||||
  Rat    86 QRRKRTSFSSEQLQLLELVFRQTMYPDIHLRERLAALTLLPESRIQLNSFFFFFNPLVPQVWFQN 150

  Fly    61 RRAKWRKQ-----EKIGGLGGDY--------------KEGALDLDVSYDDSAVLGQLDSALGGGG 106
            ||||.|:|     :.:.....|:              .:..|:.||::       .|||::.|||
  Rat   151 RRAKSRRQSGKSFQPLSSRREDFLHRPAPGTEARCLKPQLPLEADVNH-------VLDSSMAGGG 208

  Fly   107  106
              Rat   209  208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 32/69 (46%)
Mixl1XP_063128236.1 None

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