DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and Dlx3

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001099302.1 Gene:Dlx3 / 287638 RGDID:1304875 Length:287 Species:Rattus norvegicus


Alignment Length:192 Identity:57/192 - (29%)
Similarity:93/192 - (48%) Gaps:46/192 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQEKIG 72
            :|.|:.||.:::.||..|:|.||:..|..:..|.|||.::.||:.:|::||||||:|::|.    
  Rat   127 KKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKL---- 187

  Fly    73 GLGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPPQSSNSLDNELKASYGTGAMSPSR 137
                 ||.|.:.|:.|.::|      ||       :..::||  |.:|.:  .:|:.|.|.:.:.
  Rat   188 -----YKNGEVPLEHSPNNS------DS-------MACNSPP--SPALWD--TSSHSTPAPTRNP 230

  Fly   138 LSPNIFLNLNIDHLGLERGGSGLSMEWSTYPPQTQAQTHPQMDSDNQLQQHPPQ----QHAS 195
            |.|.:..:.:.::|                ...|.:..|.|..|...|||.|||    .|||
  Rat   231 LPPPLPYSASPNYL----------------DDPTNSWYHTQNLSGPHLQQQPPQPATLHHAS 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 24/55 (44%)
Dlx3NP_001099302.1 DLL_N 27..107 CDD:463567
COG5576 <109..230 CDD:227863 41/128 (32%)
Homeodomain 130..186 CDD:459649 24/55 (44%)
Blue background indicates that the domain is not in the aligned region.

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