DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pph13 and Duxbl1

DIOPT Version :10

Sequence 1:NP_477330.1 Gene:Pph13 / 33239 FlyBaseID:FBgn0023489 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_899245.1 Gene:Duxbl1 / 278672 MGIID:1916048 Length:350 Species:Mus musculus


Alignment Length:237 Identity:64/237 - (27%)
Similarity:91/237 - (38%) Gaps:62/237 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DKGTMKRKQRRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWR 66
            ||..:| :.||.||.|...|...|..||::..:|.:..||:||.:..:.|:|:.:|||||||:  
Mouse    87 DKPRVK-EARRSRTHFTKFQTDILIEAFEKNRFPGIVTREKLAQQTGIPESRIHIWFQNRRAR-- 148

  Fly    67 KQEKIGGLGGDYKEGALDLDVSYDDSAVLGQLDSALGGGGTLLPDTPPQSSNSLDNELKASYGTG 131
                                  :.|.           |..|.....|||||.....:.     .|
Mouse   149 ----------------------HPDP-----------GQNTQKTPHPPQSSQGPTQKT-----VG 175

  Fly   132 AMSPSRL---SPNIFLNLNIDH-----LGLERGGSGLSMEWSTYPPQTQAQTHP--QMDSDNQLQ 186
            .::||:.   |.::.|.|:..|     |.|.:|      .....|..|..|:..  |..||:   
Mouse   176 KLAPSKTLTSSASVILPLSPPHTPNGPLDLSKG------RQKQLPGTTLLQSSQVVQQRSDD--- 231

  Fly   187 QHPPQQHASDPIHAGSSSHHQQQQQQ--HQQEQHNPQLHPGL 226
            |:|.:.|.|.....|....|.|...|  .|...|||:...||
Mouse   232 QNPNKGHLSPTTTPGEQGFHSQPPLQLLTQNRGHNPRESGGL 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pph13NP_477330.1 Homeodomain 11..67 CDD:459649 23/55 (42%)
Duxbl1NP_899245.1 homeodomain 15..71 CDD:238039
Homeodomain 95..149 CDD:459649 23/77 (30%)
Blue background indicates that the domain is not in the aligned region.

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